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3D Structure of DNA
A Bit of Cell Biology
Algorithms for DNA Sequencing
Approximate Matching - Hamming and Edit Distance and Pigeonhole Principle
BED Format
Boyer-Moore Matching Algorithm
DNA
Edit Distance Calculation - Recursive Edit Distance of Prefixes
Epigenetics
FastA FastQ Format
Gene
Genetic Mutations
Genomics File Formats
GFF GTF GFF3 Format
Indexing The Genome - Pattern Matching, Kmer, Sorted List and Hash Table
Introduction to Genomics
motif clustering for coloring
Naive Exact Matching
Next generation sequencing (NGS) methods
NGS Applications - Various Sequencing Types
Okay... so, what is protein design?
Polymerase Chain Reaction (PCR)
Proteins
RNA
SAM BAM Format
Smith-Waterman dynamics programming for calculating edit distance
Transposons
VCF BCF Format
records
git
Libmamba - a (much) faster env solver for conda
mac config
obsidian config
Python Notes
quartz website setup
vim notes
Weekly Work Log
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Tag: algorithms
Tag: algorithms
7 items with this tag.
Apr 12, 2024
Algorithms for DNA Sequencing
courses
genomics
algorithms
python
Apr 12, 2024
Approximate Matching - Hamming and Edit Distance and Pigeonhole Principle
ngs
algorithms
Apr 12, 2024
Boyer-Moore Matching Algorithm
ngs
algorithms
python
Apr 12, 2024
Edit Distance Calculation - Recursive Edit Distance of Prefixes
ngs
algorithms
python
Apr 12, 2024
Indexing The Genome - Pattern Matching, Kmer, Sorted List and Hash Table
ngs
algorithms
python
Apr 12, 2024
Naive Exact Matching
ngs
algorithms
python
Apr 12, 2024
Smith-Waterman dynamics programming for calculating edit distance
ngs
algorithms
python